CDS

Accession Number TCMCG002C00071
gbkey CDS
Protein Id XP_020103799.1
Location complement(join(281803..282561,283203..283300,283716..283881,284524..284602,285655..285743,285837..285905,285992..286138,287194..287247,287363..287425,287533..287580,287685..287750,288357..288420,288521..288591,288701..288797,289427..289493,290094..290568))
Gene LOC109720868
GeneID 109720868
Organism Ananas comosus

Protein

Length 803aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA371634
db_source XM_020248210.1
Definition protein ROOT HAIR DEFECTIVE 3 homolog 1-like isoform X1 [Ananas comosus]

EGGNOG-MAPPER Annotation

COG_category S
Description Root hair defective
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0000166        [VIEW IN EMBL-EBI]
GO:0000902        [VIEW IN EMBL-EBI]
GO:0001882        [VIEW IN EMBL-EBI]
GO:0001883        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005525        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005773        [VIEW IN EMBL-EBI]
GO:0005774        [VIEW IN EMBL-EBI]
GO:0005783        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006888        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007010        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009826        [VIEW IN EMBL-EBI]
GO:0009832        [VIEW IN EMBL-EBI]
GO:0009888        [VIEW IN EMBL-EBI]
GO:0009932        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010015        [VIEW IN EMBL-EBI]
GO:0010053        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016049        [VIEW IN EMBL-EBI]
GO:0016192        [VIEW IN EMBL-EBI]
GO:0017076        [VIEW IN EMBL-EBI]
GO:0019001        [VIEW IN EMBL-EBI]
GO:0022622        [VIEW IN EMBL-EBI]
GO:0030029        [VIEW IN EMBL-EBI]
GO:0030036        [VIEW IN EMBL-EBI]
GO:0030154        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032549        [VIEW IN EMBL-EBI]
GO:0032550        [VIEW IN EMBL-EBI]
GO:0032553        [VIEW IN EMBL-EBI]
GO:0032555        [VIEW IN EMBL-EBI]
GO:0032561        [VIEW IN EMBL-EBI]
GO:0032989        [VIEW IN EMBL-EBI]
GO:0035639        [VIEW IN EMBL-EBI]
GO:0036094        [VIEW IN EMBL-EBI]
GO:0040007        [VIEW IN EMBL-EBI]
GO:0042546        [VIEW IN EMBL-EBI]
GO:0043167        [VIEW IN EMBL-EBI]
GO:0043168        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044437        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0048193        [VIEW IN EMBL-EBI]
GO:0048364        [VIEW IN EMBL-EBI]
GO:0048589        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048869        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0060560        [VIEW IN EMBL-EBI]
GO:0071554        [VIEW IN EMBL-EBI]
GO:0071669        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0090558        [VIEW IN EMBL-EBI]
GO:0090627        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097367        [VIEW IN EMBL-EBI]
GO:0098588        [VIEW IN EMBL-EBI]
GO:0098805        [VIEW IN EMBL-EBI]
GO:0099402        [VIEW IN EMBL-EBI]
GO:1901265        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1905392        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGATCCGGCATCGAACAACACTCAGCAGCCGCTCGGCGGTGCGGATCAGAGCATGCGCAACGCAGCTTGGCCGGCGGGCTACGGCGCGGCGACGGACGCGGACATGCAGGCGATGAGAGCCGGCATGGACTATCTGGCACACGCCGTTGCCGCCGCCGGGGGCGGCGGCGGCCAGCCGGCCGACATGAACGCGTTGCTGGGCAACCTCATGTCGCAGCTGGGAATGGCGGGGCCGGCGGGTCCCAATGTGGGCGACGAGCAGGAGGATCACCACCAGGAGGACCAGCACGAGTGGATGGGCCACCAGGTCCAGGAGCAGTCGCCGCTGTGCGTGGCCGGGCCCATGCAGATGATCGCCGGCGACGGCGCCTTCTTCGACCAGAACGTCGACGACTTCATCCACTCCGCCAGGGAGATCTCGCCCAAAAGCGCCGACTACGCCGTCGTATCCATCATCGGCGCCCAGAGCAGTGGAAAGAGCTATCTTCTCAACTGCCTCTTTGGTACCAGCTTTAAGGTGATGAATGCTTCAACAGGGAGGCGACAAACTACCAAGGGTATGTGGTTATCAAGATGTGTCAGACCTTCCTTGTTTATTATGGATGTAGAGGGTTCTGATGGGAGAGAAAGAGGAGAGGATGACACATCATTTGAAAAGCAGGGTGCCCTTTTCGCGCTGACTATTTCAGACCTTATGATGGTGAACATGTGGCTAAGGGATATTGGCCGCGAGCAAGGTGGAAGCATTCCTCTTCTCAGAACAGTTTTTCGGGAAAGGGCAAAACTTGAGCCTGGCCGAACAAAAGTGCTAGTCGTTATACGTGGCTATGACAATGAGACCCCATTTAACACATTAGTGGATGATGTGGTGACAAACATGGAAGAGCTATGGAAGTCCATACATGACCAACCTGGTAGGCCAAGAGTGTTATTCCGTGACTATATTGAGGTGTCTGTAGTAGCATTGCCTGACAAAATTCAAGAACAGAAGTTCAAAAGAGAGGTCGCAAAGTTGAGAGAATGGTTTGCTAAAAATTCTCTTGTGGGGTTCCGGCAAGACAAGGTATCAGCTTCTGATTTTTCATTTAGTGCAAAAGGGATATGGGAAGCTATCCGACAGAACAAGAGACTTAACCTTCCTGCTCACAGGGTGATGGTATCGAGCTTTTTCTGTGAAAAGGTTGTCAAGGAGAGTATCAATTCTTTAGAGTCTAATGAGGATTATTTGTCATTAAAGAAAGGTGCGCAAAGTTCTCCAAAAGAATTCAGCGAGAAATTGGGAGCCCTTCTAAAGTCGCTCTTGACTCACTTTGACACGGAGACGGAATTGTATGAAGCGCAAGAAAGGGCTGCAAAACGCCAAGAACTAGAGGATGGAGTATTGCAGCAAGTGGAGCCTATTTGCCGGGATTTATTGTATGCACTGCGCTTGAGGACATCTTCTGAAAGTAAGGACAAAATTACTAATCTATTCGGCAACGCAGATGATCCCTCCACTATAGTTGATCAGTCGGTTGAGGATTGCTTGAAAAAGTATATTGAATCATGTGAAGATTTGAGGACTAGGTACAAAAATCTATGTGACGAAAATTGTAAGGTGCTTAAAAGCGAGCTGCTGTCATTTGCTAAAATTATGGCTGAAAGGATCAAGGATATGCGCATTAGAGTGGAAGCAGAGCATGCGAGAGATGAAGCCGAACAAAAAGCCGAGCGTGTAAAAGCGGAAGCTGCACTTGCGAAAGAGGAAGCTGACCGCGAAGCCGAGCGTGCAAAAGAGGAAACAGAGCGTTTAATTGAGCAAGCGAGAAAAGAAGCTGAGCAAGCAAAACAGGAAGCAGACAAGCGCGCACGGGAAGCAGAGCTTGCAGCTACAAACAACCAGTTAAATAATCCGCTAATGGGTCTTGGTGCATTAATAGGAGCAATTGGACGGGGCATCCTTTTTGGACCAGCTGGTATGGTTGGTATGGGTGGTGGAATGTTGGGTCCTACAATGCAGAATCAGTATGGCCCCGCTACCGGCCGTGGCTTTCAACCTCCTTACCCTACACCGGACTATGGATATGAACCTCCATACCCTCCAACAAGCCATGCTTACGGAGCCCCCAACCCTTCAATGAGGCCTGGCTACAACCCGCCTGCTCAAAGTTACTCTGCTAAACCAATACCTCCTCCCAGGAACCCGGCAAACTTACCTGGTTTGCAACCTGCTAAACCAATACCTCCTCCCAGGAACCCGGCGAACTTACCTGGTTCACAGCCTGCTAAACCAATACCGCCTCCCAGGAACCTGGCGAACTTACCTGGTTCACAGCCTGCTAAACCAATACCGCCTCCTAGGAACCCCGCGAACTTACCTGGTTCACAGCCCGCTAAACCAATACCGCCTCCGAGGCAGCTTCCCAAATAG
Protein:  
MDPASNNTQQPLGGADQSMRNAAWPAGYGAATDADMQAMRAGMDYLAHAVAAAGGGGGQPADMNALLGNLMSQLGMAGPAGPNVGDEQEDHHQEDQHEWMGHQVQEQSPLCVAGPMQMIAGDGAFFDQNVDDFIHSAREISPKSADYAVVSIIGAQSSGKSYLLNCLFGTSFKVMNASTGRRQTTKGMWLSRCVRPSLFIMDVEGSDGRERGEDDTSFEKQGALFALTISDLMMVNMWLRDIGREQGGSIPLLRTVFRERAKLEPGRTKVLVVIRGYDNETPFNTLVDDVVTNMEELWKSIHDQPGRPRVLFRDYIEVSVVALPDKIQEQKFKREVAKLREWFAKNSLVGFRQDKVSASDFSFSAKGIWEAIRQNKRLNLPAHRVMVSSFFCEKVVKESINSLESNEDYLSLKKGAQSSPKEFSEKLGALLKSLLTHFDTETELYEAQERAAKRQELEDGVLQQVEPICRDLLYALRLRTSSESKDKITNLFGNADDPSTIVDQSVEDCLKKYIESCEDLRTRYKNLCDENCKVLKSELLSFAKIMAERIKDMRIRVEAEHARDEAEQKAERVKAEAALAKEEADREAERAKEETERLIEQARKEAEQAKQEADKRAREAELAATNNQLNNPLMGLGALIGAIGRGILFGPAGMVGMGGGMLGPTMQNQYGPATGRGFQPPYPTPDYGYEPPYPPTSHAYGAPNPSMRPGYNPPAQSYSAKPIPPPRNPANLPGLQPAKPIPPPRNPANLPGSQPAKPIPPPRNLANLPGSQPAKPIPPPRNPANLPGSQPAKPIPPPRQLPK